Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Pcdhb20Q91XZ9 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Gm14539-201ENSMUST00000117527 174 ntBASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Pcdhb20Q91XZ9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Olfr1385-201ENSMUST00000071807 930 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Pcdhb20Q91XZ9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb20Q91XZ9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Pcdhb20Q91XZ9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Pcdhb20Q91XZ9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Pcdhb20Q91XZ9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Gm8312-201ENSMUST00000119380 618 ntBASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Gm42474-201ENSMUST00000201073 505 ntBASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhb20Q91XZ9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Gm14435-201ENSMUST00000108995 643 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Gm6257-201ENSMUST00000163864 910 ntBASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Gm18733-201ENSMUST00000173950 856 ntBASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhb20Q91XZ9 Gm9449-201ENSMUST00000207265 1011 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms