Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Pcdhga11Q91XY8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdhga11Q91XY8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Gm45546-201ENSMUST00000211053 2394 ntBASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Gm11950-201ENSMUST00000121615 838 ntBASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Gm17808-201ENSMUST00000200859 894 ntBASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdhga11Q91XY8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Gm27704-201ENSMUST00000185094 107 ntBASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Ighv6-1-201ENSMUST00000193612 343 ntBASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdhga11Q91XY8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdhga11Q91XY8 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms