Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Gm13312-201ENSMUST00000119631 718 ntBASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pcdhgb4Q91XX6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Gm44136-201ENSMUST00000203819 1106 ntBASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pcdhgb4Q91XX6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Pcdhgb4Q91XX6 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.26
Pcdhgb4Q91XX6 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Gm6257-201ENSMUST00000163864 910 ntBASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pcdhgb4Q91XX6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Gm27704-201ENSMUST00000185094 107 ntBASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pcdhgb4Q91XX6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms