Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.67■□□□□ 0.26
TraipQ8VIG6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TraipQ8VIG6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.66■□□□□ 0.26
TraipQ8VIG6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Gm25911-201ENSMUST00000157621 56 ntBASIC16.66■□□□□ 0.26
TraipQ8VIG6 Gm27702-201ENSMUST00000184512 56 ntBASIC16.66■□□□□ 0.26
TraipQ8VIG6 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.66■□□□□ 0.26
TraipQ8VIG6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.66■□□□□ 0.26
TraipQ8VIG6 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
TraipQ8VIG6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.65■□□□□ 0.26
TraipQ8VIG6 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm4995-201ENSMUST00000117247 432 ntBASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm27397-201ENSMUST00000184997 107 ntBASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.65■□□□□ 0.26
TraipQ8VIG6 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.65■□□□□ 0.26
TraipQ8VIG6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC16.65■□□□□ 0.26
TraipQ8VIG6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TraipQ8VIG6 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TraipQ8VIG6 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.64■□□□□ 0.26
TraipQ8VIG6 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC16.64■□□□□ 0.25
TraipQ8VIG6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.64■□□□□ 0.25
TraipQ8VIG6 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TraipQ8VIG6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TraipQ8VIG6 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms