Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Pcdh18Q8VHR0 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Gm7370-201ENSMUST00000219471 767 ntBASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Pcdh18Q8VHR0 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Gm16061-201ENSMUST00000122167 857 ntBASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Pcdh18Q8VHR0 App-207ENSMUST00000227737 2827 ntBASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Pcdh18Q8VHR0 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Pcdh18Q8VHR0 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms