Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rab40cQ8VHQ4 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Mir1199-201ENSMUST00000117015 119 ntBASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 AC153881.1-201ENSMUST00000214448 284 ntBASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Odf3b-204ENSMUST00000227834 930 ntBASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rab40cQ8VHQ4 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Rab40cQ8VHQ4 Gm27463-201ENSMUST00000183569 57 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms