Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.34■□□□□ 0.05
Cdhr1Q8VHP6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdhr1Q8VHP6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Cdhr1Q8VHP6 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Cdhr1Q8VHP6 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.33■□□□□ 0.05
Cdhr1Q8VHP6 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Cdhr1Q8VHP6 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Cdhr1Q8VHP6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Gm11764-201ENSMUST00000120221 623 ntBASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Gm6257-201ENSMUST00000163864 910 ntBASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Cdhr1Q8VHP6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Cdhr1Q8VHP6 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms