Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Gm11539-201ENSMUST00000119837 557 ntBASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Rpa1Q8VEE4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rpa1Q8VEE4 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Mir1199-201ENSMUST00000117015 119 ntBASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rpa1Q8VEE4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rpa1Q8VEE4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms