Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Lsm1Q8VC85 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Tfap2a-203ENSMUST00000223869 2037 ntBASIC15.08■□□□□ 0
Lsm1Q8VC85 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Lsm1Q8VC85 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Gm15794-201ENSMUST00000120182 631 ntBASIC15.07■□□□□ 0
Lsm1Q8VC85 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Gm45328-201ENSMUST00000210942 917 ntBASIC15.07■□□□□ 0
Lsm1Q8VC85 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Lsm1Q8VC85 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.07■□□□□ 0
Lsm1Q8VC85 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.07■□□□□ 0
Lsm1Q8VC85 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.07■□□□□ 0
Lsm1Q8VC85 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Lsm1Q8VC85 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.06■□□□□ 0
Lsm1Q8VC85 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lsm1Q8VC85 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Lsm1Q8VC85 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.06■□□□□ 0
Lsm1Q8VC85 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Gm17808-201ENSMUST00000200859 894 ntBASIC15.06■□□□□ 0
Lsm1Q8VC85 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lsm1Q8VC85 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC15.06■□□□□ 0
Lsm1Q8VC85 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Lsm1Q8VC85 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Lsm1Q8VC85 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Lsm1Q8VC85 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm1Q8VC85 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC15.05■□□□□ 0
Lsm1Q8VC85 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm1Q8VC85 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Lsm1Q8VC85 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Gm1818-201ENSMUST00000169406 1184 ntBASIC15.05■□□□□ -0
Lsm1Q8VC85 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Lsm1Q8VC85 Gm29518-201ENSMUST00000190858 372 ntBASIC15.05■□□□□ -0
Lsm1Q8VC85 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.05■□□□□ -0
Lsm1Q8VC85 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.05■□□□□ -0
Lsm1Q8VC85 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Lsm1Q8VC85 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.05■□□□□ -0
Lsm1Q8VC85 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms