Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Gm37722-201ENSMUST00000193757 208 ntBASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
H2afjQ8R1M2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.61□□□□□ -0.07
H2afjQ8R1M2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
H2afjQ8R1M2 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.6□□□□□ -0.07
H2afjQ8R1M2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
H2afjQ8R1M2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
H2afjQ8R1M2 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms