Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ebf4Q8K4J2 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ebf4Q8K4J2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Gm18421-201ENSMUST00000204122 625 ntBASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Gm18115-201ENSMUST00000221209 621 ntBASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ebf4Q8K4J2 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Gm12134-201ENSMUST00000122109 520 ntBASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.34□□□□□ -0.11
Ebf4Q8K4J2 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms