Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.04■□□□□ 0.32
Trim68Q8K243 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC17.04■□□□□ 0.32
Trim68Q8K243 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim68Q8K243 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gm10175-201ENSMUST00000086013 645 ntBASIC17.04■□□□□ 0.32
Trim68Q8K243 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trim68Q8K243 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim68Q8K243 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.04■□□□□ 0.32
Trim68Q8K243 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Trim68Q8K243 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.03■□□□□ 0.32
Trim68Q8K243 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trim68Q8K243 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.02■□□□□ 0.32
Trim68Q8K243 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Trim68Q8K243 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.02■□□□□ 0.32
Trim68Q8K243 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.02■□□□□ 0.32
Trim68Q8K243 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.02■□□□□ 0.32
Trim68Q8K243 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trim68Q8K243 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.02■□□□□ 0.31
Trim68Q8K243 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim68Q8K243 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Trim68Q8K243 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.02■□□□□ 0.31
Trim68Q8K243 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trim68Q8K243 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Trim68Q8K243 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Trim68Q8K243 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Trim68Q8K243 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Gm12497-201ENSMUST00000138778 237 ntBASIC17.01■□□□□ 0.31
Trim68Q8K243 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim68Q8K243 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
Trim68Q8K243 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.01■□□□□ 0.31
Trim68Q8K243 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim68Q8K243 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.01■□□□□ 0.31
Trim68Q8K243 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.01■□□□□ 0.31
Trim68Q8K243 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trim68Q8K243 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
Trim68Q8K243 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC17■□□□□ 0.31
Trim68Q8K243 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
Trim68Q8K243 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC17■□□□□ 0.31
Trim68Q8K243 Ndufaf2-202ENSMUST00000223734 556 ntBASIC17■□□□□ 0.31
Trim68Q8K243 Bloc1s5-203ENSMUST00000224902 612 ntBASIC17■□□□□ 0.31
Trim68Q8K243 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trim68Q8K243 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms