Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.72■□□□□ 0.11
Trpm6Q8CIR4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Mir7036b-201ENSMUST00000184791 63 ntBASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 AC155252.2-201ENSMUST00000226946 680 ntBASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trpm6Q8CIR4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trpm6Q8CIR4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trpm6Q8CIR4 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Gm17271-201ENSMUST00000165535 355 ntBASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Gm12008-201ENSMUST00000117791 755 ntBASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trpm6Q8CIR4 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Gm38327-201ENSMUST00000195852 1755 ntBASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Gm27301-201ENSMUST00000184012 127 ntBASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trpm6Q8CIR4 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trpm6Q8CIR4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm6Q8CIR4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trpm6Q8CIR4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trpm6Q8CIR4 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trpm6Q8CIR4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Trpm6Q8CIR4 Gm14722-201ENSMUST00000118943 689 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms