Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Gm25406-201ENSMUST00000157599 105 ntBASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Rfwd3Q8CIK8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Gm27867-201ENSMUST00000184778 125 ntBASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Gm17971-201ENSMUST00000190239 806 ntBASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Rfwd3Q8CIK8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Rfwd3Q8CIK8 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Birc2-201ENSMUST00000054878 378 ntBASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Rfwd3Q8CIK8 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Rfwd3Q8CIK8 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms