Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.71■□□□□ 0.43
Syne4Q8CII8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Gm16198-201ENSMUST00000118766 670 ntBASIC17.71■□□□□ 0.43
Syne4Q8CII8 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Gm7286-201ENSMUST00000182691 1007 ntBASIC17.71■□□□□ 0.43
Syne4Q8CII8 Gm18057-201ENSMUST00000208220 503 ntBASIC17.71■□□□□ 0.43
Syne4Q8CII8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Syne4Q8CII8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Syne4Q8CII8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Syne4Q8CII8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.7■□□□□ 0.42
Syne4Q8CII8 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Gm27622-201ENSMUST00000183779 60 ntBASIC17.7■□□□□ 0.42
Syne4Q8CII8 Gm10253-201ENSMUST00000194270 940 ntBASIC17.7■□□□□ 0.42
Syne4Q8CII8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC17.7■□□□□ 0.42
Syne4Q8CII8 Haglr-201ENSMUST00000100000 2085 ntBASIC17.7■□□□□ 0.42
Syne4Q8CII8 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Gm24158-201ENSMUST00000175263 71 ntBASIC17.69■□□□□ 0.42
Syne4Q8CII8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Gm5745-201ENSMUST00000183748 313 ntBASIC17.69■□□□□ 0.42
Syne4Q8CII8 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Syne4Q8CII8 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm22065-201ENSMUST00000103753 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm22066-201ENSMUST00000103761 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24932-201ENSMUST00000103763 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24115-201ENSMUST00000103799 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm22190-201ENSMUST00000103827 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm22191-201ENSMUST00000103831 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24721-201ENSMUST00000103849 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm28018-201ENSMUST00000103869 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm26399-201ENSMUST00000103937 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm25349-201ENSMUST00000177728 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm23616-201ENSMUST00000177797 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm25871-201ENSMUST00000177816 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24752-201ENSMUST00000178240 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24496-201ENSMUST00000178287 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm25649-201ENSMUST00000178476 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm25548-201ENSMUST00000178681 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm23147-201ENSMUST00000178841 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm26095-201ENSMUST00000179270 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm22171-201ENSMUST00000179283 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm23936-201ENSMUST00000179354 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm22619-201ENSMUST00000179516 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm25255-201ENSMUST00000179579 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24755-201ENSMUST00000179691 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm26506-201ENSMUST00000179692 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm25086-201ENSMUST00000179931 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm23243-201ENSMUST00000180047 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24659-201ENSMUST00000180212 110 ntBASIC17.68■□□□□ 0.42
Syne4Q8CII8 Gm24169-201ENSMUST00000180244 110 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms