Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rab11fip3Q8CHD8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC20.28■□□□□ 0.84
Rab11fip3Q8CHD8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rab11fip3Q8CHD8 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rab11fip3Q8CHD8 Gm7669-201ENSMUST00000210184 1603 ntBASIC20.27■□□□□ 0.83
Rab11fip3Q8CHD8 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC20.27■□□□□ 0.83
Rab11fip3Q8CHD8 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Gm6736-201ENSMUST00000166583 948 ntBASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Gm10175-201ENSMUST00000086013 645 ntBASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Rab11fip3Q8CHD8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Prkcz2-201ENSMUST00000206136 1756 ntBASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rab11fip3Q8CHD8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Rab11fip3Q8CHD8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms