Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.31■□□□□ 0.68
Smc4Q8CG47 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Gm11779-201ENSMUST00000118541 368 ntBASIC19.3■□□□□ 0.68
Smc4Q8CG47 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Gm5264-201ENSMUST00000190584 848 ntBASIC19.3■□□□□ 0.68
Smc4Q8CG47 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC19.3■□□□□ 0.68
Smc4Q8CG47 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Smc4Q8CG47 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Gm11873-201ENSMUST00000117877 1304 ntBASIC19.29■□□□□ 0.68
Smc4Q8CG47 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.29■□□□□ 0.68
Smc4Q8CG47 Gm45167-201ENSMUST00000208007 322 ntBASIC19.29■□□□□ 0.68
Smc4Q8CG47 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 AC132104.2-201ENSMUST00000215011 266 ntBASIC19.29■□□□□ 0.68
Smc4Q8CG47 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.29■□□□□ 0.68
Smc4Q8CG47 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smc4Q8CG47 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.28■□□□□ 0.68
Smc4Q8CG47 AC151836.1-202ENSMUST00000226259 753 ntBASIC19.28■□□□□ 0.68
Smc4Q8CG47 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 AC122901.1-201ENSMUST00000214203 1790 ntBASIC19.28■□□□□ 0.68
Smc4Q8CG47 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smc4Q8CG47 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Smc4Q8CG47 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.27■□□□□ 0.68
Smc4Q8CG47 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.27■□□□□ 0.68
Smc4Q8CG47 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms