Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim52Q8CDV4 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Gm11025-201ENSMUST00000140773 466 ntBASIC19.3■□□□□ 0.68
Trim52Q8CDV4 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim52Q8CDV4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.3■□□□□ 0.68
Trim52Q8CDV4 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Nrn1-204ENSMUST00000224323 1779 ntBASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trim52Q8CDV4 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gm14701-201ENSMUST00000117156 348 ntBASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gm16198-201ENSMUST00000118766 670 ntBASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Rpph1-201ENSMUST00000175096 319 ntBASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gm13332-201ENSMUST00000120451 1398 ntBASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.28■□□□□ 0.68
Trim52Q8CDV4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Gm13365-201ENSMUST00000121188 973 ntBASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Trim52Q8CDV4 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim52Q8CDV4 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.27■□□□□ 0.67
Trim52Q8CDV4 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trim52Q8CDV4 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trim52Q8CDV4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms