Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pabpn1Q8CCS6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Pabpn1Q8CCS6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Gm28760-201ENSMUST00000185995 736 ntBASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC24.07■■□□□ 1.44
Pabpn1Q8CCS6 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Mir1897-201ENSMUST00000122581 272 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Gm21854-201ENSMUST00000179901 471 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Gm46209-201ENSMUST00000217912 553 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Dmtn-210ENSMUST00000228824 2377 ntBASIC24.06■■□□□ 1.44
Pabpn1Q8CCS6 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Gm13226-201ENSMUST00000117838 404 ntBASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpn1Q8CCS6 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Gm3436-201ENSMUST00000179930 840 ntBASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Gm9797-201ENSMUST00000052902 613 ntBASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Pabpn1Q8CCS6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Gm5828-201ENSMUST00000071842 1860 ntBASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Snora78-201ENSMUST00000158630 128 ntBASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Gm27701-201ENSMUST00000184498 110 ntBASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 AC238811.3-201ENSMUST00000225422 709 ntBASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pabpn1Q8CCS6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpn1Q8CCS6 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC24.01■■□□□ 1.43
Pabpn1Q8CCS6 Rn7s1-201ENSMUST00000174924 300 ntBASIC24.01■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms