Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Gm27628-201ENSMUST00000184911 107 ntBASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Gm5364-201ENSMUST00000216789 889 ntBASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.16■□□□□ 0.34
Prpf31Q8CCF0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gm15358-201ENSMUST00000119249 520 ntBASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gm5682-201ENSMUST00000173402 505 ntBASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Prpf31Q8CCF0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Prpf31Q8CCF0 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Prpf31Q8CCF0 Grk6-207ENSMUST00000225925 2769 ntBASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gm2308-201ENSMUST00000166539 1004 ntBASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gm19164-201ENSMUST00000210667 640 ntBASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Psmb5-202ENSMUST00000227257 622 ntBASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Prpf31Q8CCF0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Prpf31Q8CCF0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Hivep3-201ENSMUST00000084306 2973 ntBASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Prpf31Q8CCF0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms