Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rft1Q8C3B8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rft1Q8C3B8 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Rft1Q8C3B8 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Gm9013-201ENSMUST00000132939 882 ntBASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rft1Q8C3B8 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rft1Q8C3B8 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Gm6345-202ENSMUST00000180900 204 ntBASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Gm5587-201ENSMUST00000206270 674 ntBASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.03□□□□□ -0.16
Rft1Q8C3B8 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Ntrk2-205ENSMUST00000224402 2284 ntBASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Rft1Q8C3B8 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms