Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Scfd1Q8BRF7 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Gm14722-201ENSMUST00000118943 689 ntBASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.9■□□□□ 0.46
Scfd1Q8BRF7 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scfd1Q8BRF7 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scfd1Q8BRF7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scfd1Q8BRF7 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Scfd1Q8BRF7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Gm13337-201ENSMUST00000119183 1594 ntBASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Gm14822-201ENSMUST00000122247 291 ntBASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Scfd1Q8BRF7 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 H2af-ps-201ENSMUST00000119066 295 ntBASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Gm13597-201ENSMUST00000121239 375 ntBASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Scfd1Q8BRF7 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Gm23935-201ENSMUST00000102303 57 ntBASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Gm24270-201ENSMUST00000102326 57 ntBASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Gm24245-201ENSMUST00000157318 57 ntBASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Scfd1Q8BRF7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms