Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Rd3Q8BRE0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Gm6257-201ENSMUST00000163864 910 ntBASIC16.63■□□□□ 0.25
Rd3Q8BRE0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Rd3Q8BRE0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Gm19164-201ENSMUST00000210667 640 ntBASIC16.62■□□□□ 0.25
Rd3Q8BRE0 AC151836.1-202ENSMUST00000226259 753 ntBASIC16.62■□□□□ 0.25
Rd3Q8BRE0 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Rd3Q8BRE0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.61■□□□□ 0.25
Rd3Q8BRE0 AC122024.2-201ENSMUST00000220086 871 ntBASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rd3Q8BRE0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.6■□□□□ 0.25
Rd3Q8BRE0 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms