Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.98■□□□□ 0.15
Sfr1Q8BP27 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sfr1Q8BP27 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Sfr1Q8BP27 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Gm7506-201ENSMUST00000207758 815 ntBASIC15.97■□□□□ 0.15
Sfr1Q8BP27 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Sfr1Q8BP27 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Gm6257-201ENSMUST00000163864 910 ntBASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Sfr1Q8BP27 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Sfr1Q8BP27 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Sfr1Q8BP27 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm4609-201ENSMUST00000106443 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm5138-201ENSMUST00000113842 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm15191-201ENSMUST00000117933 1000 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm12182-201ENSMUST00000118655 1008 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm13882-201ENSMUST00000120886 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm10284-201ENSMUST00000145057 1005 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm10481-201ENSMUST00000179228 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm2574-201ENSMUST00000181051 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm3200-201ENSMUST00000181493 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm8825-201ENSMUST00000182565 998 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm4518-201ENSMUST00000182638 718 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm8330-201ENSMUST00000182754 1008 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm4575-201ENSMUST00000182991 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm8709-201ENSMUST00000183230 1012 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Sfr1Q8BP27 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms