Protein–RNA interactions for Protein: Q8BP01

Vmac, Vimentin-type intermediate filament-associated coiled-coil protein, mousemouse

Predictions only

Length 174 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VmacQ8BP01 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VmacQ8BP01 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.05■□□□□ 0.48
VmacQ8BP01 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VmacQ8BP01 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
VmacQ8BP01 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
VmacQ8BP01 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.04■□□□□ 0.48
VmacQ8BP01 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
VmacQ8BP01 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.04■□□□□ 0.48
VmacQ8BP01 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.04■□□□□ 0.48
VmacQ8BP01 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.04■□□□□ 0.48
VmacQ8BP01 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC18.04■□□□□ 0.48
VmacQ8BP01 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC18.04■□□□□ 0.48
VmacQ8BP01 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
VmacQ8BP01 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
VmacQ8BP01 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VmacQ8BP01 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Asic1-205ENSMUST00000228185 1818 ntBASIC18.03■□□□□ 0.48
VmacQ8BP01 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC18.03■□□□□ 0.48
VmacQ8BP01 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC18.03■□□□□ 0.48
VmacQ8BP01 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.03■□□□□ 0.48
VmacQ8BP01 Gm6089-201ENSMUST00000197666 938 ntBASIC18.03■□□□□ 0.48
VmacQ8BP01 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18.03■□□□□ 0.48
VmacQ8BP01 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VmacQ8BP01 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VmacQ8BP01 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
VmacQ8BP01 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
VmacQ8BP01 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.02■□□□□ 0.48
VmacQ8BP01 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.02■□□□□ 0.48
VmacQ8BP01 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.02■□□□□ 0.48
VmacQ8BP01 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.02■□□□□ 0.48
VmacQ8BP01 Gm6376-201ENSMUST00000209407 580 ntBASIC18.02■□□□□ 0.48
VmacQ8BP01 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VmacQ8BP01 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VmacQ8BP01 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.02■□□□□ 0.47
VmacQ8BP01 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
VmacQ8BP01 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.47
VmacQ8BP01 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
VmacQ8BP01 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
VmacQ8BP01 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.01■□□□□ 0.47
VmacQ8BP01 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC18.01■□□□□ 0.47
VmacQ8BP01 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
VmacQ8BP01 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.01■□□□□ 0.47
VmacQ8BP01 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
VmacQ8BP01 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
VmacQ8BP01 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VmacQ8BP01 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.01■□□□□ 0.47
VmacQ8BP01 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VmacQ8BP01 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms