Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 App-207ENSMUST00000227737 2827 ntBASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ckap4Q8BMK4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ckap4Q8BMK4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ckap4Q8BMK4 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Gm25016-201ENSMUST00000158399 131 ntBASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ckap4Q8BMK4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms