Protein–RNA interactions for Protein: Q8BIF2

Rbfox3, RNA binding protein fox-1 homolog 3, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox3Q8BIF2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 AC114585.2-202ENSMUST00000228094 426 ntBASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Gm29340-201ENSMUST00000188763 3854 ntBASIC12.11□□□□□ -0.47
Rbfox3Q8BIF2 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Rbfox3Q8BIF2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Gm7284-201ENSMUST00000131667 944 ntBASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Rbfox3Q8BIF2 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms