Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lrrtm4Q80XG9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 AV026068-213ENSMUST00000223675 1171 ntBASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lrrtm4Q80XG9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lrrtm4Q80XG9 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Gm15358-201ENSMUST00000119249 520 ntBASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Mir5126-201ENSMUST00000175513 77 ntBASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lrrtm4Q80XG9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Gm12350-201ENSMUST00000121208 462 ntBASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lrrtm4Q80XG9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms