Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ccdc116Q80X53 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ccdc116Q80X53 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Gm27704-201ENSMUST00000185094 107 ntBASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ccdc116Q80X53 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ccdc116Q80X53 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ccdc116Q80X53 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms