Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gm11780-201ENSMUST00000136880 516 ntBASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.67■□□□□ 0.1
Rpp38Q80UU2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rpp38Q80UU2 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gm43347-201ENSMUST00000200226 580 ntBASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 AC158538.2-201ENSMUST00000225455 906 ntBASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rpp38Q80UU2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Gm4535-201ENSMUST00000182274 558 ntBASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Gm17971-201ENSMUST00000190239 806 ntBASIC15.65■□□□□ 0.1
Rpp38Q80UU2 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Gm10355-201ENSMUST00000097146 517 ntBASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rpp38Q80UU2 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rpp38Q80UU2 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Rpp38Q80UU2 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC15.64■□□□□ 0.09
Rpp38Q80UU2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC15.64■□□□□ 0.09
Rpp38Q80UU2 Gm44357-201ENSMUST00000195897 142 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms