Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gm8000-201ENSMUST00000188378 592 ntBASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gm43935-201ENSMUST00000203569 1050 ntBASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdh19Q80TF3 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Gm27525-201ENSMUST00000184465 107 ntBASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdh19Q80TF3 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Gm14140-201ENSMUST00000119999 995 ntBASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdh19Q80TF3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Gm15358-201ENSMUST00000119249 520 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Gm27628-201ENSMUST00000184911 107 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Gm37153-201ENSMUST00000193637 231 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 AC154222.1-201ENSMUST00000223882 475 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdh19Q80TF3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms