Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Rpap1Q80TE0 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Rpap1Q80TE0 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rpap1Q80TE0 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Gm15693-201ENSMUST00000120470 637 ntBASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 H2-Pa-201ENSMUST00000182803 626 ntBASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rpap1Q80TE0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Rpap1Q80TE0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Gm45244-201ENSMUST00000211328 2200 ntBASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Gm6973-201ENSMUST00000117080 721 ntBASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Gm10499-201ENSMUST00000174094 934 ntBASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rpap1Q80TE0 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Wdyhv1-203ENSMUST00000226889 394 ntBASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Rbfox2-208ENSMUST00000227930 1218 ntBASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Gm2423-201ENSMUST00000074863 733 ntBASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rpap1Q80TE0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.46
Rpap1Q80TE0 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rpap1Q80TE0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Rpap1Q80TE0 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Rpap1Q80TE0 Gm45774-201ENSMUST00000211992 2665 ntBASIC24.14■■□□□ 1.46
Rpap1Q80TE0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Rpap1Q80TE0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC24.14■■□□□ 1.45
Rpap1Q80TE0 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Gm44729-201ENSMUST00000206759 2052 ntBASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
Rpap1Q80TE0 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rpap1Q80TE0 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC24.12■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms