Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Prpf38bQ80SY5 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.4■□□□□ 0.22
Prpf38bQ80SY5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Prpf38bQ80SY5 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Prpf38bQ80SY5 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Gm5745-201ENSMUST00000183748 313 ntBASIC16.37■□□□□ 0.21
Prpf38bQ80SY5 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms