Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Shc4Q6S5L9 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.68□□□□□ -0.06
Shc4Q6S5L9 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Gm6089-201ENSMUST00000197666 938 ntBASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Gm5364-201ENSMUST00000216789 889 ntBASIC14.67□□□□□ -0.06
Shc4Q6S5L9 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Shc4Q6S5L9 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Gm37500-201ENSMUST00000192059 1443 ntBASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Shc4Q6S5L9 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gm8000-201ENSMUST00000188378 592 ntBASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gm15590-201ENSMUST00000078419 552 ntBASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Shc4Q6S5L9 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms