Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Ddx58Q6Q899 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Gm4995-201ENSMUST00000117247 432 ntBASIC19.38■□□□□ 0.69
Ddx58Q6Q899 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Mir3113-201ENSMUST00000175478 76 ntBASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Gm38318-201ENSMUST00000195769 1706 ntBASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 AC174742.1-201ENSMUST00000218272 304 ntBASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Gm10175-201ENSMUST00000086013 645 ntBASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Ddx58Q6Q899 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ddx58Q6Q899 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Gm5366-201ENSMUST00000215494 1338 ntBASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Gm44945-201ENSMUST00000206764 1187 ntBASIC19.36■□□□□ 0.69
Ddx58Q6Q899 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ddx58Q6Q899 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Gm14722-201ENSMUST00000118943 689 ntBASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Ddx58Q6Q899 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms