Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm18766-201ENSMUST00000189811 808 ntBASIC13.2□□□□□ -0.3
Rif1Q6PR54 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.2□□□□□ -0.3
Rif1Q6PR54 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm12091-201ENSMUST00000146791 830 ntBASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm24694-201ENSMUST00000180054 110 ntBASIC13.2□□□□□ -0.3
Rif1Q6PR54 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm27663-201ENSMUST00000184839 110 ntBASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rif1Q6PR54 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC13.19□□□□□ -0.3
Rif1Q6PR54 Gm5035-201ENSMUST00000215581 927 ntBASIC13.19□□□□□ -0.3
Rif1Q6PR54 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.19□□□□□ -0.3
Rif1Q6PR54 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.19□□□□□ -0.3
Rif1Q6PR54 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rif1Q6PR54 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.18□□□□□ -0.3
Rif1Q6PR54 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.18□□□□□ -0.3
Rif1Q6PR54 Gm9824-201ENSMUST00000178707 561 ntBASIC13.18□□□□□ -0.3
Rif1Q6PR54 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Gm18753-201ENSMUST00000201000 566 ntBASIC13.18□□□□□ -0.3
Rif1Q6PR54 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Gm45784-201ENSMUST00000188360 142 ntBASIC13.18□□□□□ -0.3
Rif1Q6PR54 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rif1Q6PR54 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.17□□□□□ -0.3
Rif1Q6PR54 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rif1Q6PR54 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms