Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Smarcd3Q6P9Z1 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Smarcd3Q6P9Z1 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Smarcd3Q6P9Z1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Mir7071-201ENSMUST00000184847 69 ntBASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Smarcd3Q6P9Z1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm10052-201ENSMUST00000168019 960 ntBASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Gm7729-201ENSMUST00000050143 801 ntBASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Smarcd3Q6P9Z1 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Gm11355-201ENSMUST00000121120 306 ntBASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Gm22697-201ENSMUST00000175194 63 ntBASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Krtap5-1-202ENSMUST00000188274 742 ntBASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Smarcd3Q6P9Z1 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms