Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Clcn1Q64347 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.83■□□□□ 0.76
Clcn1Q64347 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clcn1Q64347 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC19.82■□□□□ 0.76
Clcn1Q64347 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clcn1Q64347 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.82■□□□□ 0.76
Clcn1Q64347 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC19.82■□□□□ 0.76
Clcn1Q64347 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Clcn1Q64347 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clcn1Q64347 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC19.82■□□□□ 0.76
Clcn1Q64347 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.81■□□□□ 0.76
Clcn1Q64347 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC19.81■□□□□ 0.76
Clcn1Q64347 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC19.81■□□□□ 0.76
Clcn1Q64347 AC158982.1-201ENSMUST00000228377 901 ntBASIC19.81■□□□□ 0.76
Clcn1Q64347 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clcn1Q64347 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Clcn1Q64347 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Clcn1Q64347 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clcn1Q64347 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clcn1Q64347 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Gm45747-201ENSMUST00000212203 999 ntBASIC19.8■□□□□ 0.76
Clcn1Q64347 AC155252.2-201ENSMUST00000226946 680 ntBASIC19.8■□□□□ 0.76
Clcn1Q64347 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
Clcn1Q64347 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clcn1Q64347 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clcn1Q64347 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clcn1Q64347 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Gm13216-201ENSMUST00000117145 591 ntBASIC19.79■□□□□ 0.76
Clcn1Q64347 Gm12892-201ENSMUST00000117367 1146 ntBASIC19.79■□□□□ 0.76
Clcn1Q64347 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC19.79■□□□□ 0.76
Clcn1Q64347 AC154572.2-201ENSMUST00000225105 997 ntBASIC19.79■□□□□ 0.76
Clcn1Q64347 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.79■□□□□ 0.76
Clcn1Q64347 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Clcn1Q64347 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clcn1Q64347 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC19.78■□□□□ 0.76
Clcn1Q64347 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clcn1Q64347 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms