Protein–RNA interactions for Protein: Q62425

Ndufa4, Cytochrome c oxidase subunit NDUFA4, mousemouse

Known RBP Predictions only

Length 82 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa4Q62425 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Trmt13-210ENSMUST00000198454 880 ntBASIC11.41□□□□□ -0.58
Ndufa4Q62425 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Ndufa4Q62425 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.4□□□□□ -0.58
Ndufa4Q62425 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gm5643-201ENSMUST00000117081 966 ntBASIC11.4□□□□□ -0.58
Ndufa4Q62425 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gm11539-201ENSMUST00000119837 557 ntBASIC11.4□□□□□ -0.58
Ndufa4Q62425 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gm45760-201ENSMUST00000212190 1782 ntBASIC11.4□□□□□ -0.58
Ndufa4Q62425 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Ndufa4Q62425 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.4□□□□□ -0.59
Ndufa4Q62425 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Ndufa4Q62425 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Ndufa4Q62425 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms