Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC18.34■□□□□ 0.53
Scn9aQ62205 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC18.34■□□□□ 0.53
Scn9aQ62205 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.34■□□□□ 0.53
Scn9aQ62205 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Scn9aQ62205 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 Gm14127-201ENSMUST00000117906 678 ntBASIC18.33■□□□□ 0.53
Scn9aQ62205 Gm8318-201ENSMUST00000182954 872 ntBASIC18.33■□□□□ 0.53
Scn9aQ62205 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC18.33■□□□□ 0.53
Scn9aQ62205 AC160980.1-201ENSMUST00000224136 970 ntBASIC18.33■□□□□ 0.53
Scn9aQ62205 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.33■□□□□ 0.53
Scn9aQ62205 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Scn9aQ62205 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn9aQ62205 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scn9aQ62205 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Scn9aQ62205 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Scn9aQ62205 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn9aQ62205 Gm13453-201ENSMUST00000118708 357 ntBASIC18.33■□□□□ 0.52
Scn9aQ62205 Gm14719-201ENSMUST00000121891 340 ntBASIC18.33■□□□□ 0.52
Scn9aQ62205 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC18.33■□□□□ 0.52
Scn9aQ62205 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Scn9aQ62205 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC18.33■□□□□ 0.52
Scn9aQ62205 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.33■□□□□ 0.52
Scn9aQ62205 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Scn9aQ62205 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.32■□□□□ 0.52
Scn9aQ62205 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Scn9aQ62205 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Scn9aQ62205 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Scn9aQ62205 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Scn9aQ62205 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn9aQ62205 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Scn9aQ62205 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC18.31■□□□□ 0.52
Scn9aQ62205 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC18.31■□□□□ 0.52
Scn9aQ62205 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scn9aQ62205 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Scn9aQ62205 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Scn9aQ62205 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC18.3■□□□□ 0.52
Scn9aQ62205 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Gm12490-201ENSMUST00000120255 560 ntBASIC18.3■□□□□ 0.52
Scn9aQ62205 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Scn9aQ62205 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Scn9aQ62205 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Scn9aQ62205 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn9aQ62205 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn9aQ62205 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Scn9aQ62205 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.29■□□□□ 0.52
Scn9aQ62205 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC18.29■□□□□ 0.52
Scn9aQ62205 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Scn9aQ62205 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms