Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC15.84■□□□□ 0.13
Six4Q61321 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Six4Q61321 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.84■□□□□ 0.13
Six4Q61321 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.84■□□□□ 0.13
Six4Q61321 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.84■□□□□ 0.13
Six4Q61321 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.84■□□□□ 0.13
Six4Q61321 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Six4Q61321 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six4Q61321 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Six4Q61321 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six4Q61321 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.83■□□□□ 0.13
Six4Q61321 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Six4Q61321 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six4Q61321 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Six4Q61321 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Six4Q61321 Gm25990-201ENSMUST00000102440 86 ntBASIC15.83■□□□□ 0.12
Six4Q61321 Gm8344-201ENSMUST00000119813 856 ntBASIC15.83■□□□□ 0.12
Six4Q61321 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Mir8098-201ENSMUST00000184011 137 ntBASIC15.83■□□□□ 0.12
Six4Q61321 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC15.83■□□□□ 0.12
Six4Q61321 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.83■□□□□ 0.12
Six4Q61321 AC159106.1-201ENSMUST00000224421 690 ntBASIC15.83■□□□□ 0.12
Six4Q61321 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Six4Q61321 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Six4Q61321 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Six4Q61321 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.82■□□□□ 0.12
Six4Q61321 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.82■□□□□ 0.12
Six4Q61321 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Six4Q61321 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.82■□□□□ 0.12
Six4Q61321 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC15.82■□□□□ 0.12
Six4Q61321 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.82■□□□□ 0.12
Six4Q61321 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC15.82■□□□□ 0.12
Six4Q61321 Gm19164-201ENSMUST00000210667 640 ntBASIC15.82■□□□□ 0.12
Six4Q61321 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.82■□□□□ 0.12
Six4Q61321 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Six4Q61321 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.81■□□□□ 0.12
Six4Q61321 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.81■□□□□ 0.12
Six4Q61321 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Six4Q61321 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.81■□□□□ 0.12
Six4Q61321 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.81■□□□□ 0.12
Six4Q61321 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC15.81■□□□□ 0.12
Six4Q61321 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.81■□□□□ 0.12
Six4Q61321 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Six4Q61321 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.8■□□□□ 0.12
Six4Q61321 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Six4Q61321 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.8■□□□□ 0.12
Six4Q61321 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.8■□□□□ 0.12
Six4Q61321 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Six4Q61321 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Six4Q61321 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms