Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Ripk1Q60855 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.84□□□□□ -0.03
Ripk1Q60855 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.84□□□□□ -0.03
Ripk1Q60855 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ripk1Q60855 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ripk1Q60855 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.83□□□□□ -0.03
Ripk1Q60855 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ripk1Q60855 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.83□□□□□ -0.03
Ripk1Q60855 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ripk1Q60855 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
Ripk1Q60855 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Rprl3-201ENSMUST00000157400 290 ntBASIC14.83□□□□□ -0.04
Ripk1Q60855 Gm27704-201ENSMUST00000185094 107 ntBASIC14.83□□□□□ -0.04
Ripk1Q60855 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.83□□□□□ -0.04
Ripk1Q60855 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.83□□□□□ -0.04
Ripk1Q60855 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ripk1Q60855 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC14.83□□□□□ -0.04
Ripk1Q60855 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ripk1Q60855 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ripk1Q60855 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Ripk1Q60855 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ripk1Q60855 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Ripk1Q60855 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.82□□□□□ -0.04
Ripk1Q60855 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ripk1Q60855 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Ripk1Q60855 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.82□□□□□ -0.04
Ripk1Q60855 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ripk1Q60855 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
Ripk1Q60855 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ripk1Q60855 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Gm7284-201ENSMUST00000131667 944 ntBASIC14.81□□□□□ -0.04
Ripk1Q60855 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Mir3081-201ENSMUST00000175305 84 ntBASIC14.81□□□□□ -0.04
Ripk1Q60855 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.81□□□□□ -0.04
Ripk1Q60855 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ripk1Q60855 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ripk1Q60855 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms