Protein–RNA interactions for Protein: Q60793

Klf4, Krueppel-like factor 4, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Klf4Q60793 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Klf4Q60793 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Klf4Q60793 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
Klf4Q60793 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Klf4Q60793 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Klf4Q60793 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Klf4Q60793 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Klf4Q60793 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Klf4Q60793 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Klf4Q60793 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.78□□□□□ -0.04
Klf4Q60793 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Klf4Q60793 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.78□□□□□ -0.04
Klf4Q60793 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.78□□□□□ -0.04
Klf4Q60793 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Klf4Q60793 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Klf4Q60793 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.77□□□□□ -0.04
Klf4Q60793 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.77□□□□□ -0.04
Klf4Q60793 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.77□□□□□ -0.04
Klf4Q60793 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Klf4Q60793 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Klf4Q60793 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Klf4Q60793 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC14.77□□□□□ -0.05
Klf4Q60793 Olfr129-201ENSMUST00000122318 993 ntBASIC14.77□□□□□ -0.05
Klf4Q60793 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.77□□□□□ -0.05
Klf4Q60793 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
Klf4Q60793 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Klf4Q60793 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.05
Klf4Q60793 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.77□□□□□ -0.05
Klf4Q60793 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.77□□□□□ -0.05
Klf4Q60793 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.77□□□□□ -0.05
Klf4Q60793 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Klf4Q60793 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Klf4Q60793 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Klf4Q60793 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Klf4Q60793 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Klf4Q60793 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 AA414768-201ENSMUST00000121924 1257 ntBASIC14.76□□□□□ -0.05
Klf4Q60793 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.76□□□□□ -0.05
Klf4Q60793 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Klf4Q60793 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Gm27742-201ENSMUST00000184667 60 ntBASIC14.76□□□□□ -0.05
Klf4Q60793 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Klf4Q60793 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC14.76□□□□□ -0.05
Klf4Q60793 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Klf4Q60793 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms