Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-2Q5R1I4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-2Q5R1I4 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trav6-2Q5R1I4 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trav6-2Q5R1I4 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 AC158538.2-201ENSMUST00000225455 906 ntBASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trav6-2Q5R1I4 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Gm11025-201ENSMUST00000140773 466 ntBASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Haglr-201ENSMUST00000100000 2085 ntBASIC13.75□□□□□ -0.21
Trav6-2Q5R1I4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trav6-2Q5R1I4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms