Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav6d-4Q5R1I0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Gm43514-201ENSMUST00000198852 424 ntBASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Gm15590-201ENSMUST00000078419 552 ntBASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav6d-4Q5R1I0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav6d-4Q5R1I0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Grk6-207ENSMUST00000225925 2769 ntBASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Gm15358-201ENSMUST00000119249 520 ntBASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Gm18206-201ENSMUST00000207027 926 ntBASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav6d-4Q5R1I0 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms