Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 Gm18018-201ENSMUST00000198273 408 ntBASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC15.01□□□□□ -0.01
Col27a1Q5QNQ9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Gm15653-201ENSMUST00000119247 907 ntBASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Col27a1Q5QNQ9 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm43630-201ENSMUST00000201550 776 ntBASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Col27a1Q5QNQ9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Mir6420-201ENSMUST00000185032 102 ntBASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Col27a1Q5QNQ9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Gm4875-201ENSMUST00000118257 786 ntBASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Gm12091-201ENSMUST00000146791 830 ntBASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Gm8602-201ENSMUST00000184045 607 ntBASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Gm37748-201ENSMUST00000194379 1140 ntBASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Gm45668-201ENSMUST00000211271 493 ntBASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Col27a1Q5QNQ9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Gm6266-201ENSMUST00000203844 806 ntBASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Col27a1Q5QNQ9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms