Protein–RNA interactions for Protein: Q5F4S9

Trpm3, Transient receptor potential cation channel, subfamily M, member 3, mousemouse

Predictions only

Length 1,721 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm3Q5F4S9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Trpm3Q5F4S9 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Mir6990-201ENSMUST00000183724 91 ntBASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Gm5628-201ENSMUST00000222318 1049 ntBASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trpm3Q5F4S9 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.71■□□□□ 0.74
Trpm3Q5F4S9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Mir7023-201ENSMUST00000185093 64 ntBASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Gm10154-201ENSMUST00000084445 354 ntBASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trpm3Q5F4S9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trpm3Q5F4S9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Gm2272-201ENSMUST00000194903 582 ntBASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trpm3Q5F4S9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trpm3Q5F4S9 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms