Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Gm7775-201ENSMUST00000218871 853 ntBASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Shank3Q4ACU6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Gm9824-201ENSMUST00000178707 561 ntBASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Mir8102-201ENSMUST00000184148 139 ntBASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Shank3Q4ACU6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm27920-201ENSMUST00000183953 96 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm6888-201ENSMUST00000221983 706 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm7901-201ENSMUST00000120430 1597 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm7488-201ENSMUST00000117148 684 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm15483-201ENSMUST00000120338 456 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Gm44855-201ENSMUST00000205725 362 ntBASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Shank3Q4ACU6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Shank3Q4ACU6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Shank3Q4ACU6 Gm42934-201ENSMUST00000196920 1345 ntBASIC19.33■□□□□ 0.69
Shank3Q4ACU6 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Shank3Q4ACU6 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Shank3Q4ACU6 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Shank3Q4ACU6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Klk2-ps-201ENSMUST00000205342 571 ntBASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.31■□□□□ 0.68
Shank3Q4ACU6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Shank3Q4ACU6 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms