Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cdkl5Q3UTQ8 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Gm21362-201ENSMUST00000194272 928 ntBASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cdkl5Q3UTQ8 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Gm7935-201ENSMUST00000100555 1278 ntBASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cdkl5Q3UTQ8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Gm7669-201ENSMUST00000210184 1603 ntBASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Ank2-226ENSMUST00000189368 339 ntBASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Ptprs-211ENSMUST00000223859 5588 ntBASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cdkl5Q3UTQ8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkl5Q3UTQ8 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkl5Q3UTQ8 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cdkl5Q3UTQ8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms