Protein–RNA interactions for Protein: Q3UM18

Lsg1, Large subunit GTPase 1 homolog, mousemouse

Known RBP Predictions only

Length 644 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsg1Q3UM18 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsg1Q3UM18 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Gm45058-201ENSMUST00000205810 766 ntBASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsg1Q3UM18 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lsg1Q3UM18 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 AC174678.1-201ENSMUST00000228007 2749 ntBASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Gm24841-201ENSMUST00000158676 357 ntBASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lsg1Q3UM18 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Gm7638-201ENSMUST00000121348 967 ntBASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lsg1Q3UM18 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lsg1Q3UM18 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms